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TDOC-335
NBIA - Perform experiments to determine requirements for Keycloak integration to NBIA
Provide documentation/JIRA tickets for any requirements the TCIA team needs from NBIA within the quarter. Requirements due end of January. for discussion in February.
Collection wiki page clean up: Propose and implement a solution to clarify when we’re linking to “External Resources” that are websites out of our control such as PDC, GDC, & NCTN Archive that host non-image data related to our collections
Create JIRA ticket for PRISM (Collection manager?) to see if we can programmatically display the information in Datacite about our citations via their API
Usage metrics: Contine to link Pub DOIs to Dataset DOIs as they are available in Endnote xml RelationType for Citations and References in Datacite using information from https://www.cancerimagingarchive.net/endnote/Pubs_basedon_TCIA.xml
Aspera - Create packages for the Q2 datasets in this list: https://docs.google.com/spreadsheets/d/1BU1RX0DHOHkBr3qzDfZeaBdLLjRFn032VdoBCM21JMs/edit?usp=sharing
Update our curation SOPs to inform each curation team to use that citation style
On the wiki page for each collection, in the Citation tab, update the "publication citation" with NIH all authors format
Add Aspera and API download stats into Data Usage Stats
Q2-2021 - February Monthly Report
Get user counts for this month (exclusive Month Day-Month Day 2021)
Get user counts for this month (exclusive Month Day-Month Day 2021)
Collect pubs for this month (February 2021)
Collect download counts for NLST and TCIA and disk-transfers
Add Aspera and API download stats into Data Usage Stats
Q2-2021 - January Monthly Report
Get user counts for this month (exclusive Month Day-Month Day 2021)
Collect pubs for this month (January 2021)
Collect download counts for NLST and TCIA and disk-transfers
Biobank Pathology workflow finalized and documented with Van Andel and available data (at least one case) transferred and submitted to pathDB
APOLLO: Progress on APOLLO-2 Pathology collection and hosting (Integrates with the Eagle-Scope & PathDB projects)
APOLLO: Progress on GYN-COE APOLLO-5 DICOM workflow (Integrates with the Eagle-Scope & PathDB projects)
POSDA: Provide public-relations blurb about our curation process, how it was externally vetted, etc
POSDA: Create updated documentation and training materials for 0.8 release
POSDA: Upgrade all Posda deployments < 0.8 to 0.8 or newer
Collections: Implement a new feature, use the Submissions Service Desk to notify a new team that a 2nd public review is needed. https://nih.app.box.com/file/714887545659?s=nylkp9zmqdm4q8th1wamddmbpvkhiob9 (JIRA Service Desk)
Defacing TCIA images: Start using the Extended DUA for restricted collections at risk of facial ID
Test and deploy any new releases (at least to v7.7)
Setup design discussion meetings scheduled to brainstorm, followed by a couple more meetings to review prototype solutions and then do the actual implementation.
Add Aspera and API download stats into Data Usage Stats
Q2-2021 - December Monthly Report
Get user counts for this month (exclusive Month Day-Month Day 2020)
Collect pubs for this month (December 2020)
Collect download counts for NLST and TCIA and disk-transfers
Pathology Evaluate PathDB feedback document (PathDB Feature Requests) and create plan to address it via PRISM so that this can eventually be integrated into the main TCIA stack
Update all the old citations that we have on existing Collection pagesNDR-193
NLST-706: Request for CT Images
NLST-727: Request for Path Images
NLST-730: Request for Path Images
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data-simple-status=\"{"id":"10202","name":"Backlog","description":"","iconUrl":"/images/icons/subtask.gif","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Backlog</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/subtask.gif\" value=\"10203\" title=\"Selected for Development\" data-simple-status=\"{"id":"10203","name":"Selected for Development","description":"","iconUrl":"/images/icons/subtask.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Selected for Development</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10302\" title=\"Waiting for Support\" data-simple-status=\"{"id":"10302","name":"Waiting for Support","description":"This was auto-generated by JIRA Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Waiting for Support</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10303\" title=\"Waiting for Customer\" data-simple-status=\"{"id":"10303","name":"Waiting for Customer","description":"This was auto-generated by JIRA Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Waiting for Customer</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10304\" title=\"Waiting for Triage\" data-simple-status=\"{"id":"10304","name":"Waiting for Triage","description":"This was auto-generated by JIRA Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Waiting for Triage</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/statuses/information.png\" value=\"10305\" title=\"In Review\" data-simple-status=\"{"id":"10305","name":"In Review","description":"","iconUrl":"/images/icons/statuses/information.png","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">In Review</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10306\" title=\"Under Review\" data-simple-status=\"{"id":"10306","name":"Under Review","description":"","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Under Review</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10307\" title=\"Released\" data-simple-status=\"{"id":"10307","name":"Released","description":"Subtasks include:\\nConfirm all images are \\"Visible\\"\\nUpdate Private Wiki\\nClose TCS issue\\nTest with non-admin login\\nSocial Media: Facebook, LinkedIn, Twitter\\nupdate landing page with \\"Public\\"\\nConfirm public-facing wiki page is accurate\\nConfirm DOI links work","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Released</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10308\" title=\"Cancelled\" data-simple-status=\"{"id":"10308","name":"Cancelled","description":"","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Cancelled</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10309\" title=\"Rejected\" data-simple-status=\"{"id":"10309","name":"Rejected","description":"","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Rejected</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/statuses/generic.png\" value=\"10406\" title=\"Declined\" data-simple-status=\"{"id":"10406","name":"Declined","description":"This was auto-generated by JIRA Service Desk during workflow import","iconUrl":"/images/icons/statuses/generic.png","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Declined</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10407\" title=\"Awaiting approval\" data-simple-status=\"{"id":"10407","name":"Awaiting approval","description":"This was auto-generated by JIRA Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":1,"key":"undefined","colorName":"default"}}\">Awaiting approval</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10408\" title=\"Awaiting implementation\" data-simple-status=\"{"id":"10408","name":"Awaiting implementation","description":"This was auto-generated by JIRA Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":1,"key":"undefined","colorName":"default"}}\">Awaiting implementation</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10409\" title=\"Review/Test\" data-simple-status=\"{"id":"10409","name":"Review/Test","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Review/Test</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10410\" title=\"Requirements\" data-simple-status=\"{"id":"10410","name":"Requirements","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Requirements</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10411\" title=\"Archive\" data-simple-status=\"{"id":"10411","name":"Archive","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Archive</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10507\" title=\"Refinement\" data-simple-status=\"{"id":"10507","name":"Refinement","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Refinement</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/statuses/generic.png\" value=\"10508\" title=\"Next\" data-simple-status=\"{"id":"10508","name":"Next","description":"Highest Priority work items that are understood well enough for work to beging","iconUrl":"/images/icons/statuses/generic.png","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Next</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/statuses/generic.png\" value=\"10509\" title=\"Testing\" data-simple-status=\"{"id":"10509","name":"Testing","description":"","iconUrl":"/images/icons/statuses/generic.png","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Testing</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10510\" title=\"Review\" data-simple-status=\"{"id":"10510","name":"Review","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Review</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10606\" title=\"Approved\" data-simple-status=\"{"id":"10606","name":"Approved","description":"","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Approved</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10607\" title=\"Green Light\" data-simple-status=\"{"id":"10607","name":"Green Light","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Green Light</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10706\" title=\"Change Control\" data-simple-status=\"{"id":"10706","name":"Change Control","description":"This status is managed internally by JIRA Software","iconUrl":"/","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Change Control</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10806\" title=\"Pending\" data-simple-status=\"{"id":"10806","name":"Pending","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Pending</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10807\" title=\"Canceled\" data-simple-status=\"{"id":"10807","name":"Canceled","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Canceled</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10808\" title=\"Escalated\" data-simple-status=\"{"id":"10808","name":"Escalated","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Escalated</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10809\" title=\"Waiting for approval\" data-simple-status=\"{"id":"10809","name":"Waiting for approval","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Waiting for approval</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10810\" title=\"Awaiting CAB approval\" data-simple-status=\"{"id":"10810","name":"Awaiting CAB approval","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Awaiting CAB approval</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10811\" title=\"Planning\" data-simple-status=\"{"id":"10811","name":"Planning","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Planning</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10812\" title=\"Implementing\" data-simple-status=\"{"id":"10812","name":"Implementing","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Implementing</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10813\" title=\"Peer review / change manager approval\" data-simple-status=\"{"id":"10813","name":"Peer review / change manager approval","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Peer review / change manager approval</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10814\" title=\"Work in progress\" data-simple-status=\"{"id":"10814","name":"Work in progress","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Work in progress</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10815\" title=\"Completed\" data-simple-status=\"{"id":"10815","name":"Completed","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Completed</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/status_generic.gif\" value=\"10816\" title=\"Under investigation\" data-simple-status=\"{"id":"10816","name":"Under investigation","description":"This was auto-generated by Jira Service Desk during workflow import","iconUrl":"/images/icons/status_generic.gif","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Under investigation</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/statuses/generic.png\" value=\"10907\" title=\"Waiting for Release\" data-simple-status=\"{"id":"10907","name":"Waiting for Release","description":"","iconUrl":"/images/icons/statuses/generic.png","statusCategory":{"id":3,"key":"done","colorName":"success"}}\">Waiting for Release</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"10908\" title=\"Stuck\" data-simple-status=\"{"id":"10908","name":"Stuck","description":"This status is managed internally by Jira Software","iconUrl":"/","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Stuck</option>\n <option class=\"imagebacked\" data-icon=\"/images/icons/statuses/generic.png\" value=\"11006\" title=\"On Hold\" data-simple-status=\"{"id":"11006","name":"On Hold","description":"","iconUrl":"/images/icons/statuses/generic.png","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">On Hold</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"11106\" title=\"Ready For Prod\" data-simple-status=\"{"id":"11106","name":"Ready For Prod","description":"This status is managed internally by Jira Software","iconUrl":"/","statusCategory":{"id":4,"key":"indeterminate","colorName":"inprogress"}}\">Ready For Prod</option>\n <option class=\"imagebacked\" data-icon=\"/\" value=\"11206\" title=\"Paused\" data-simple-status=\"{"id":"11206","name":"Paused","description":"This status is managed internally by Jira Software","iconUrl":"/","statusCategory":{"id":2,"key":"new","colorName":"default"}}\">Paused</option>\n </optgroup>\n</select>\n </div>\n \n","validSearcher":true,"isShown":true}}}
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0.3
0